Software for Cheyenne users

These software packages and others are or will be available on the Cheyenne system or for use on Geyser and Caldera*.

Contact the CISL Help Desk if you have suggestions for additional software to include or if a package that you need is not yet available.


Applications and analysis packages

  • CDAT - Climate Data Analysis Tools
  • CDO - Climate Data Operators
  • Gnuplot
  • IDL - Interactive Data Language
  • JasPer
  • MATLAB and toolboxes
  • NCAR Graphics
  • NCL - NCAR Command Language
  • Ncview
  • Octave
  • R
  • VAPOR* - Visualization and Analysis Platform for Ocean, Atmosphere, and Solar Researchers
  • VisIt*
  • VTK* - Visualization ToolKit

Community models

  • CESM - Community Earth System Model
  • DART - Data Assimilation Research Testbed
  • ESMF - Earth System Modeling Framework
  • MM5 - PSU/NCAR Mesoscale Model
  • MOZART - Model for OZone and Related chemical Tracers
  • NRCM - Nested Regional Climate Model
  • WRF - Weather Research & Forecasting

Libraries

  • BLAS - Basic Linear Algebra Subprograms
  • Charm++
  • FFTW - Fastest Fourier Transform in the West
  • HDF5
  • LAPACK - Linear Algebra PACKage
  • Linux math libraries - GSL, MKL, OpenBLAS
  • NetCDF - Network Common Data Form
  • PETSc - Portable, Extensible Toolkit for Scientific Computation
  • PnetCDF - Parallel netCDF
  • ScaLAPACK
  • Trilinos

Performance and optimization tools

  • Allinea MAP
  • Allinea Performance Reports
  • Intel Advisor
  • Intel Inspector
  • Intel Trace Analyzer and Collector (ITAC)
  • Intel VTune Amplifier
  • TAU - Tuning and Analysis Utilities

Programming support

  • Allinea DDT
  • Bazaar
  • Git
  • IPython
  • Mercurial
  • Perl
  • Python, PyNGL, PyNIO
  • Ruby
  • SVN - Subversion
  • TcL

Utilities

  • BBCP
  • CMake
  • Emacs
  • ftools
  • Ghostscript
  • GNU Parallel
  • GNU Screen
  • NCO - netCDF Operators
  • NEdit
  • Vim
  • VNC* - Virtual Network Computing
  • WGRIB / WGRIB2
  • XDiff
  • Xxdiff
 

 

* Those marked with an asterisk should be run only on the Geyser and Caldera clusters because of their graphics and GPU requirements. Others can be used on Cheyenne. Check the man pages for any program to get additional information.

Related training courses